Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dolichyl-phosphate-mannose--protein mannosyltransferase | DEP83_03340 | Not Available | Positive | 807953 - 809557 | 61223.9 |
| nad-dependent epimerase | DEP83_03345 | Not Available | Positive | 809554 - 810567 | 37987.2 |
| amidohydrolase | DEP83_03350 | Not Available | Negative | 810604 - 811527 | 35247.7 |
| sorbitol dehydrogenase | DEP83_03355 | Not Available | Negative | 811547 - 812560 | 36800.6 |
| aldo/keto reductase | DEP83_03360 | Not Available | Negative | 812572 - 813504 | 34940.4 |
| glycoside hydrolase family 2 | DEP83_03365 | Not Available | Negative | 813516 - 816131 | 97793.8 |
| hypothetical protein | DEP83_03370 | Not Available | Negative | 816131 - 818296 | 84263.8 |
| sialate o-acetylesterase | DEP83_03375 | Not Available | Negative | 818618 - 820138 | 56167.6 |
| dna-binding protein | DEP83_03380 | Not Available | Negative | 820228 - 823782 | 133920.0 |
| beta-galactosidase | DEP83_03385 | Not Available | Negative | 823810 - 826680 | 109685.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
