Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DEP83_02940 | Not Available | Negative | 724225 - 726282 | 77708.2 |
| susc/raga family tonb-linked outer membrane protein | DEP83_02945 | Not Available | Negative | 726312 - 729482 | 119343.0 |
| hydrolase | DEP83_02950 | Not Available | Negative | 729503 - 730954 | 54503.2 |
| hypothetical protein | DEP83_02955 | Not Available | Negative | 730966 - 732771 | 66167.5 |
| dna-binding transcriptional activator | DEP83_02960 | Not Available | Positive | 733091 - 735580 | 96240.2 |
| hypothetical protein | DEP83_02965 | Not Available | Negative | 735599 - 736543 | 35870.2 |
| beta-glucanase | DEP83_02970 | Not Available | Positive | 736729 - 737529 | 30207.4 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | DEP83_02975 | Not Available | Negative | 737591 - 738049 | 17436.8 |
| 7-cyano-7-deazaguanine synthase quec | DEP83_02980 | Not Available | Negative | 738070 - 738741 | 25227.0 |
| hypothetical protein | DEP83_02985 | Not Available | Positive | 738932 - 739276 | 13294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
