Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l31 | DEP83_00220 | Not Available | Negative | 47573 - 47830 | 9864.88 |
| damage-inducible protein cina | DEP83_00225 | Not Available | Positive | 47971 - 49224 | 46717.7 |
| serine--trna ligase | DEP83_00230 | Not Available | Negative | 49221 - 50492 | 47496.9 |
| trna lysidine(34) synthetase tils | DEP83_00235 | Not Available | Negative | 50888 - 52207 | 51064.5 |
| phenylalanine--trna ligase subunit alpha | DEP83_00240 | Not Available | Positive | 52333 - 53352 | 38795.6 |
| duf4831 domain-containing protein | DEP83_00245 | Not Available | Positive | 53478 - 54554 | 40628.8 |
| hypothetical protein | DEP83_00250 | Not Available | Positive | 54554 - 55408 | 32858.0 |
| polyisoprenoid-binding protein | DEP83_00255 | Not Available | Negative | 55375 - 55953 | 21517.0 |
| fe-s cluster assembly protein sufb | DEP83_00260 | Not Available | Positive | 56192 - 57643 | 53992.9 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 56696 - 57049 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
