Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | DEP83_02890 | Not Available | Positive | 708342 - 709088 | 28400.3 |
| shikimate dehydrogenase | DEP83_02895 | Not Available | Positive | 709163 - 709915 | 28653.6 |
| hypothetical protein | DEP83_02900 | Not Available | Negative | 710068 - 710733 | 24525.9 |
| hypothetical protein | DEP83_02905 | Not Available | Positive | 711039 - 713462 | 92306.1 |
| sigma-54-dependent fis family transcriptional regulator | DEP83_02910 | Not Available | Negative | 713457 - 714812 | 50294.7 |
| peptidase m24 | DEP83_02915 | Not Available | Positive | 714996 - 716168 | 42753.0 |
| glutaminase | DEP83_02920 | Not Available | Negative | 716253 - 718757 | 93537.7 |
| alpha-mannosidase | DEP83_02925 | Not Available | Negative | 718810 - 721101 | 86869.8 |
| hypothetical protein | DEP83_02930 | Not Available | Negative | 721137 - 723311 | 83808.5 |
| hypothetical protein | DEP83_02935 | Not Available | Negative | 723393 - 724202 | 30282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
