Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosidase | DEP83_02685 | Not Available | Negative | 641795 - 642874 | 40147.7 |
| glycoside hydrolase 43 family protein | DEP83_02690 | Not Available | Negative | 642967 - 644550 | 59316.1 |
| glycosyl hydrolase family 5 | DEP83_02695 | Not Available | Negative | 644609 - 646306 | 62281.6 |
| hypothetical protein | DEP83_02705 | Not Available | Negative | 648469 - 650244 | 65459.4 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_02710 | Not Available | Negative | 650277 - 651950 | 61708.1 |
| susc/raga family tonb-linked outer membrane protein | DEP83_02715 | Not Available | Negative | 651969 - 655088 | 114346.0 |
| alpha-xylosidase | DEP83_02720 | Not Available | Negative | 655310 - 658174 | 110034.0 |
| hybrid sensor histidine kinase/response regulator | DEP83_02725 | Not Available | Negative | 658301 - 662503 | 160991.0 |
| mfs transporter | DEP83_02730 | Not Available | Negative | 662507 - 663787 | 47152.8 |
| hypothetical protein | DEP83_02735 | Not Available | Negative | 663873 - 665228 | 51588.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
