Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna ligase (nad(+)) liga | DEP83_02485 | Not Available | Negative | 595893 - 597902 | 75879.5 |
| hypothetical protein | DEP83_02490 | Not Available | Negative | 597911 - 598978 | 40454.6 |
| mate family efflux transporter | DEP83_02495 | Not Available | Negative | 599018 - 600289 | 47188.6 |
| aspartate 1-decarboxylase | DEP83_02500 | Not Available | Negative | 600406 - 600756 | 13037.7 |
| pantoate--beta-alanine ligase | DEP83_02505 | Not Available | Negative | 600760 - 601602 | 31128.5 |
| glycogen synthase | DEP83_02510 | Not Available | Positive | 601800 - 602618 | 31682.7 |
| hypothetical protein | DEP83_02515 | Not Available | Positive | 602754 - 604148 | 52072.5 |
| hypothetical protein | DEP83_02520 | Not Available | Positive | 604174 - 604707 | 20647.3 |
| nadh-quinone oxidoreductase subunit a | DEP83_02525 | Not Available | Positive | 604980 - 605348 | 13536.0 |
| nadh-quinone oxidoreductase subunit b | DEP83_02530 | Not Available | Positive | 605324 - 605968 | 24038.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
