Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DEP83_02330 | Not Available | Negative | 557002 - 558105 | 42515.9 |
| dihydroorotase | DEP83_02335 | Not Available | Negative | 558202 - 559542 | 49173.9 |
| dolichyl-phosphate beta-d-mannosyltransferase | DEP83_02340 | Not Available | Negative | 559553 - 560302 | 28587.8 |
| Trna-met | Not Available | Not Available | Positive | 560420 - 560495 | Not Available |
| septal ring lytic transglycosylase rlpa family lipoprotein | DEP83_02350 | Not Available | Positive | 560574 - 561050 | 17822.1 |
| alpha-mannosidase | DEP83_02355 | Not Available | Negative | 561055 - 563343 | 86727.3 |
| metal-independent alpha-mannosidase | DEP83_02360 | Not Available | Negative | 563346 - 564797 | 54538.9 |
| transcriptional regulator | DEP83_02365 | Not Available | Negative | 564846 - 565325 | 18130.0 |
| amidohydrolase | DEP83_02370 | Not Available | Negative | 565441 - 566628 | 43044.6 |
| duf1015 domain-containing protein | DEP83_02375 | Not Available | Negative | 566758 - 567999 | 47007.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
