Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DEP83_02280 | Not Available | Positive | 545606 - 546040 | 15984.4 |
| nitric oxide reductase large subunit | DEP83_02285 | Not Available | Positive | 546094 - 548340 | 84751.0 |
| iron-sulfur cluster repair di-iron protein | DEP83_02290 | Not Available | Positive | 548425 - 549144 | 27206.6 |
| thiamine diphosphokinase | DEP83_02295 | Not Available | Positive | 549253 - 549879 | 23172.6 |
| dna repair protein reco | DEP83_02300 | Not Available | Negative | 549925 - 550647 | 27981.0 |
| 50s ribosomal protein l19 | DEP83_02305 | Not Available | Negative | 550843 - 551193 | 13399.5 |
| 5'-nucleotidase | DEP83_02310 | Not Available | Positive | 551417 - 552169 | 27770.4 |
| metallophosphatase | DEP83_02315 | Not Available | Positive | 552181 - 553011 | 31206.9 |
| glycoside hydrolase | DEP83_02320 | Not Available | Positive | 553107 - 555962 | 105199.0 |
| 3-dehydroquinate synthase | DEP83_02325 | Not Available | Positive | 555971 - 557026 | 39188.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
