Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | DEP83_02130 | Not Available | Negative | 499372 - 500160 | 28535.1 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | DEP83_02135 | Not Available | Negative | 500181 - 501566 | 51932.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DEP83_02140 | Not Available | Negative | 501726 - 502772 | 37250.6 |
| Trna-pro | Not Available | Not Available | Positive | 502925 - 503000 | Not Available |
| glucuronyl hydrolase | DEP83_02150 | Not Available | Negative | 503075 - 504328 | 47736.5 |
| glycoside hydrolase family 2 | DEP83_02155 | Not Available | Negative | 504434 - 507211 | 105548.0 |
| heparinase ii/iii family protein | DEP83_02160 | Not Available | Negative | 507214 - 509124 | 72853.5 |
| hypothetical protein | DEP83_02165 | Not Available | Negative | 509127 - 510626 | 56934.2 |
| lipase | DEP83_02170 | Not Available | Negative | 510659 - 511381 | 27469.7 |
| hypothetical protein | DEP83_02175 | Not Available | Negative | 511404 - 514103 | 101945.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
