Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | DEP83_02080 | Not Available | Positive | 490246 - 490656 | 15376.0 |
| ferredoxin | DEP83_02085 | Not Available | Positive | 490666 - 491535 | 30177.7 |
| electron transport complex subunit rsxc | DEP83_02090 | Not Available | Positive | 491551 - 492882 | 47244.1 |
| na+-transporting nadh:ubiquinone oxidoreductase subunit d | DEP83_02095 | Not Available | Positive | 492903 - 493868 | 34319.0 |
| electron transporter rnfg | DEP83_02100 | Not Available | Positive | 493861 - 494538 | 24206.9 |
| electron transport complex subunit rsxe | DEP83_02105 | Not Available | Positive | 494531 - 495118 | 20898.7 |
| electron transport complex subunit rsxa | DEP83_02110 | Not Available | Positive | 495121 - 495705 | 20942.9 |
| hypothetical protein | DEP83_02115 | Not Available | Positive | 495931 - 497367 | 54642.9 |
| acyltransferase | DEP83_02120 | Not Available | Negative | 497462 - 498337 | 32971.1 |
| agmatine deiminase | DEP83_02125 | Not Available | Negative | 498300 - 499367 | 40361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
