Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_02030 | Not Available | Negative | 469846 - 470145 | 11514.7 |
| sigma-70 family rna polymerase sigma factor | DEP83_02035 | Not Available | Negative | 470142 - 470723 | 22697.1 |
| pectate lyase | DEP83_02040 | Not Available | Negative | 470843 - 473950 | 116244.0 |
| hybrid sensor histidine kinase/response regulator | DEP83_02045 | Not Available | Negative | 474008 - 478384 | 167364.0 |
| calcium-translocating p-type atpase, pmca-type | DEP83_02050 | Not Available | Negative | 478400 - 481150 | 99891.8 |
| elongation factor g | DEP83_02055 | Not Available | Positive | 481476 - 483632 | 79964.4 |
| nadp-dependent isocitrate dehydrogenase | DEP83_02060 | Not Available | Negative | 483783 - 485003 | 45784.5 |
| citrate synthase | DEP83_02065 | Not Available | Negative | 485009 - 486364 | 50787.2 |
| nadp-dependent isocitrate dehydrogenase | DEP83_02070 | Not Available | Negative | 486481 - 487737 | 46088.6 |
| aconitate hydratase | DEP83_02075 | Not Available | Negative | 487762 - 490017 | 81846.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
