Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_01980 | Not Available | Positive | 457793 - 458113 | 11517.5 |
| polyribonucleotide nucleotidyltransferase | DEP83_01985 | Not Available | Positive | 458356 - 460530 | 79991.0 |
| indolepyruvate ferredoxin oxidoreductase | DEP83_01990 | Not Available | Positive | 460781 - 462391 | 58388.3 |
| indolepyruvate oxidoreductase subunit beta | DEP83_01995 | Not Available | Positive | 462361 - 462936 | 20571.9 |
| phenylacetate--coa ligase | DEP83_02000 | Not Available | Positive | 462938 - 464236 | 49015.0 |
| acetolactate synthase | DEP83_02005 | Not Available | Positive | 464363 - 464788 | 15653.0 |
| plp-dependent aminotransferase family protein | DEP83_02010 | Not Available | Positive | 464875 - 466077 | 44845.5 |
| sodium ion-translocating decarboxylase subunit beta | DEP83_02015 | Not Available | Negative | 466197 - 467405 | 42406.9 |
| oxaloacetate decarboxylase | DEP83_02020 | Not Available | Negative | 467408 - 469342 | 71092.0 |
| hypothetical protein | DEP83_02025 | Not Available | Negative | 469361 - 469612 | 8997.28 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
