Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3098 domain-containing protein | DEP83_00120 | Not Available | Positive | 23486 - 23731 | 8764.18 |
| udp-diphosphatase | DEP83_00125 | Not Available | Positive | 23768 - 24649 | 32404.9 |
| trna pseudouridine(55) synthase trub | DEP83_00130 | Not Available | Positive | 24655 - 25350 | 26100.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | DEP83_00135 | Not Available | Positive | 25347 - 26399 | 40620.8 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | DEP83_00140 | Not Available | Positive | 26404 - 26892 | 18245.0 |
| phospholipase | DEP83_00145 | Not Available | Positive | 26991 - 27860 | 32435.4 |
| alpha-amylase | DEP83_00150 | Not Available | Positive | 27872 - 29566 | 64840.4 |
| ribose-phosphate pyrophosphokinase | DEP83_00155 | Not Available | Positive | 29678 - 30613 | 34247.6 |
| duf4332 domain-containing protein | DEP83_00160 | Not Available | Positive | 30808 - 31215 | 14902.9 |
| phosphotyrosine protein phosphatase | DEP83_00165 | Not Available | Negative | 31265 - 31774 | 19488.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
