Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 433625 - 433712 | Not Available |
| hydrolase tatd | DEP83_01880 | Not Available | Negative | 433841 - 434623 | 29670.2 |
| hypothetical protein | DEP83_01885 | Not Available | Negative | 434623 - 435315 | 26935.4 |
| isoprenyl synthetase | DEP83_01890 | Not Available | Negative | 435332 - 436309 | 36797.4 |
| energy transducer tonb | DEP83_01895 | Not Available | Negative | 436384 - 437082 | 26262.6 |
| hypoxanthine phosphoribosyltransferase | DEP83_01900 | Not Available | Negative | 437222 - 437758 | 20238.6 |
| sialidase | DEP83_01905 | Not Available | Negative | 437841 - 439466 | 59582.3 |
| trna (adenosine(37)-n6)-methyltransferase trmm | DEP83_01910 | Not Available | Negative | 439618 - 440334 | 26916.5 |
| endopeptidase la | DEP83_01915 | Not Available | Positive | 440445 - 442907 | 92976.0 |
| calcium:proton exchanger | DEP83_01920 | Not Available | Negative | 442992 - 443924 | 33475.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
