Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | DEP83_01675 | Not Available | Positive | 382068 - 383789 | 65503.9 |
| hypothetical protein | DEP83_01680 | Not Available | Negative | 383904 - 384788 | 33032.1 |
| rna polymerase subunit sigma-24 | DEP83_01685 | Not Available | Positive | 384979 - 385572 | 23131.7 |
| qace family quaternary ammonium compound efflux smr transporter | DEP83_01690 | Not Available | Negative | 386544 - 386885 | 12438.7 |
| hypothetical protein | DEP83_01695 | Not Available | Negative | 386912 - 389992 | 119314.0 |
| exonuclease sbccd subunit d | DEP83_01700 | Not Available | Negative | 389989 - 391215 | 45934.6 |
| abc transporter permease | DEP83_01705 | Not Available | Negative | 391271 - 392518 | 46758.6 |
| pyridoxal phosphate-dependent aminotransferase | DEP83_01710 | Not Available | Negative | 392524 - 393720 | 44674.7 |
| hypothetical protein | DEP83_01715 | Not Available | Positive | 393918 - 395619 | 65855.5 |
| hypothetical protein | DEP83_01720 | Not Available | Positive | 395620 - 395850 | 8633.41 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
