Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_01625 | Not Available | Positive | 370332 - 372842 | 94568.1 |
| site-specific tyrosine recombinase xerd | DEP83_01630 | Not Available | Positive | 372817 - 373716 | 34582.1 |
| dna polymerase iii subunit beta | DEP83_01635 | Not Available | Positive | 373821 - 374945 | 41506.9 |
| dna polymerase iii subunit epsilon | DEP83_01640 | Not Available | Positive | 374957 - 375727 | 29094.6 |
| trna pseudouridine(38-40) synthase trua | DEP83_01645 | Not Available | Positive | 375738 - 376490 | 28218.8 |
| transcription termination factor rho | DEP83_01650 | Not Available | Negative | 376495 - 378444 | 72527.0 |
| hypothetical protein | DEP83_01655 | Not Available | Negative | 378702 - 379766 | 41004.9 |
| hypothetical protein | DEP83_01660 | Not Available | Negative | 379805 - 379984 | 7124.94 |
| electron transfer flavoprotein subunit beta | DEP83_01665 | Not Available | Positive | 380080 - 380952 | 31872.2 |
| electron transfer flavoprotein subunit alpha | DEP83_01670 | Not Available | Positive | 380971 - 381990 | 37248.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
