Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | DEP83_01370 | Not Available | Negative | 309429 - 310733 | 48906.1 |
| aminopeptidase | DEP83_01375 | Not Available | Negative | 310775 - 311944 | 43742.6 |
| lysr family transcriptional regulator | DEP83_01380 | Not Available | Positive | 312144 - 313031 | 34032.1 |
| putative sulfate exporter family transporter | DEP83_01385 | Not Available | Positive | 313143 - 314099 | 35026.2 |
| hypothetical protein | DEP83_01390 | Not Available | Positive | 314200 - 314655 | 17410.3 |
| ribonuclease h | DEP83_01395 | Not Available | Positive | 314665 - 315288 | 23618.2 |
| ribonuclease p protein component | DEP83_01400 | Not Available | Positive | 315385 - 315801 | 15730.3 |
| membrane protein insertion efficiency factor yidd | DEP83_01405 | Not Available | Positive | 315795 - 316070 | 10384.7 |
| hypothetical protein | DEP83_01410 | Not Available | Positive | 316074 - 316775 | 27170.2 |
| uroporphyrinogen-iii synthase | DEP83_01415 | Not Available | Negative | 316780 - 317544 | 29605.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
