Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | DEP83_01320 | Not Available | Negative | 300041 - 301093 | 40189.3 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | DEP83_01325 | Not Available | Negative | 301090 - 301617 | 20384.3 |
| glucose-1-phosphate thymidylyltransferase | DEP83_01330 | Not Available | Negative | 301628 - 302554 | 34293.2 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DEP83_01335 | Not Available | Negative | 302597 - 303271 | 25333.6 |
| hypothetical protein | DEP83_01340 | Not Available | Negative | 303380 - 305839 | 90496.6 |
| dna-binding protein | DEP83_01345 | Not Available | Negative | 305953 - 306114 | 6096.39 |
| duf340 domain-containing protein | DEP83_01350 | Not Available | Positive | 306194 - 306454 | 9332.88 |
| hypothetical protein | DEP83_01355 | Not Available | Positive | 306460 - 307062 | 21618.3 |
| hypothetical protein | DEP83_01360 | Not Available | Positive | 307200 - 308300 | 41036.3 |
| hypothetical protein | DEP83_01365 | Not Available | Positive | 308231 - 309499 | 48119.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
