Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_01170 | Not Available | Positive | 260108 - 261316 | 44481.5 |
| duf5115 domain-containing protein | DEP83_01175 | Not Available | Positive | 261279 - 262751 | 52908.5 |
| alpha-amylase | DEP83_01180 | Not Available | Positive | 262820 - 264649 | 71151.2 |
| alpha-amylase | DEP83_01185 | Not Available | Positive | 264726 - 267143 | 90841.1 |
| flavodoxin | DEP83_01190 | Not Available | Positive | 267373 - 267879 | 18565.9 |
| alpha-amylase | DEP83_01195 | Not Available | Negative | 267867 - 269243 | 52470.8 |
| mfs transporter | DEP83_01200 | Not Available | Negative | 269380 - 270909 | 55796.3 |
| laci family transcriptional regulator | DEP83_01205 | Not Available | Negative | 271089 - 272195 | 41482.8 |
| arginine deiminase | DEP83_01210 | Not Available | Positive | 272283 - 273557 | 47537.6 |
| noncanonical pyrimidine nucleotidase, yjjg family | DEP83_01215 | Not Available | Negative | 273541 - 274233 | 27085.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
