Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DEP83_01120 | Not Available | Negative | 246338 - 247597 | 46458.0 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DEP83_01125 | Not Available | Negative | 247621 - 249087 | 54067.4 |
| hypothetical protein | DEP83_01130 | Not Available | Negative | 249091 - 251289 | 82232.5 |
| hypothetical protein | DEP83_01135 | Not Available | Negative | 251336 - 251680 | 13310.4 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | DEP83_01140 | Not Available | Negative | 251691 - 252626 | 35139.8 |
| cell division/cell wall cluster transcriptional repressor mraz | DEP83_01145 | Not Available | Negative | 252638 - 253090 | 17577.4 |
| glycerol acyltransferase | DEP83_01150 | Not Available | Positive | 253363 - 254187 | 31668.2 |
| hemolysin | DEP83_01155 | Not Available | Positive | 254212 - 255201 | 38385.4 |
| susc/raga family protein | DEP83_01160 | Not Available | Positive | 255476 - 258487 | 111200.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_01165 | Not Available | Positive | 258516 - 260093 | 58779.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
