Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system phd/yefm family antitoxin | DEP83_00015 | Not Available | Positive | 950 - 1171 | 8480.36 |
| hypothetical protein | DEP83_00020 | Not Available | Positive | 1180 - 1509 | 13170.0 |
| Trna-val | Not Available | Not Available | Positive | 2232 - 2309 | Not Available |
| adenylosuccinate lyase | DEP83_00035 | Not Available | Positive | 2593 - 3936 | 51217.3 |
| pseudouridine synthase | DEP83_00040 | Not Available | Positive | 4055 - 5248 | 45547.7 |
| asparagine--trna ligase | DEP83_00045 | Not Available | Positive | 5369 - 6766 | 53400.6 |
| elongation factor 4 | DEP83_00050 | Not Available | Positive | 6782 - 8569 | 66714.0 |
| hypothetical protein | DEP83_00055 | Not Available | Positive | 8682 - 9074 | 14912.9 |
| hypothetical protein | DEP83_00060 | Not Available | Negative | 9176 - 9922 | 28114.7 |
| pkd domain-containing protein | DEP83_00065 | Not Available | Negative | 9977 - 10921 | 34341.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
