Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transporter, opt family | DEP83_09065 | Not Available | Negative | 2245680 - 2247698 | 71353.0 |
| s9 family peptidase | DEP83_09070 | Not Available | Positive | 2248168 - 2250327 | 82238.9 |
| hypothetical protein | DEP83_09075 | Not Available | Positive | 2250608 - 2251714 | 42586.7 |
| hypothetical protein | DEP83_09080 | Not Available | Negative | 2251953 - 2252468 | 19527.3 |
| hypothetical protein | DEP83_09085 | Not Available | Negative | 2252465 - 2253097 | 23841.0 |
| rna polymerase subunit sigma-70 | DEP83_09090 | Not Available | Negative | 2253087 - 2253596 | 20079.3 |
| 30s ribosomal protein s12 | DEP83_09095 | Not Available | Positive | 2254253 - 2254672 | 15223.7 |
| 30s ribosomal protein s7 | DEP83_09100 | Not Available | Positive | 2254835 - 2255311 | 18171.1 |
| elongation factor g | DEP83_09105 | Not Available | Positive | 2255333 - 2257462 | 78345.5 |
| 30s ribosomal protein s10 | DEP83_09110 | Not Available | Positive | 2257473 - 2257778 | 11344.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
