Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate lyase-activating protein | DEP83_08965 | Not Available | Positive | 2218732 - 2219439 | 26705.3 |
| atpase | DEP83_08970 | Not Available | Negative | 2219810 - 2221099 | 48736.0 |
| tonb-dependent receptor | DEP83_08975 | Not Available | Positive | 2221543 - 2224743 | 119992.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_08980 | Not Available | Positive | 2224730 - 2226733 | 77194.4 |
| hypothetical protein | DEP83_08985 | Not Available | Positive | 2226755 - 2228095 | 50901.4 |
| hypothetical protein | DEP83_08990 | Not Available | Positive | 2228099 - 2229286 | 44105.2 |
| gdp-mannose 4,6-dehydratase | DEP83_08995 | Not Available | Positive | 2229638 - 2230684 | 39744.6 |
| gdp-l-fucose synthase | DEP83_09000 | Not Available | Positive | 2230821 - 2231933 | 41421.8 |
| hypothetical protein | DEP83_09005 | Not Available | Positive | 2232036 - 2232221 | 6883.3 |
| putative beta-lysine n-acetyltransferase | DEP83_09010 | Not Available | Negative | 2232232 - 2233068 | 31637.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
