Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fe-s cluster assembly atpase sufc | DEP83_08860 | Not Available | Negative | 2195302 - 2196045 | 27696.5 |
| abc transporter atp-binding protein | DEP83_08865 | Not Available | Negative | 2196179 - 2196973 | 29889.2 |
| abc transporter permease | DEP83_08870 | Not Available | Negative | 2196985 - 2197734 | 27348.4 |
| hypothetical protein | DEP83_08875 | Not Available | Positive | 2197532 - 2198551 | 39371.5 |
| yihy/virulence factor brkb family protein | DEP83_08880 | Not Available | Negative | 2198620 - 2200170 | 58974.3 |
| alpha-amylase | DEP83_08890 | Not Available | Positive | 2200710 - 2202167 | 56186.4 |
| lyttr family transcriptional regulator | DEP83_08895 | Not Available | Negative | 2202237 - 2203091 | 33233.7 |
| hypothetical protein | DEP83_08900 | Not Available | Positive | 2203292 - 2204401 | 43003.7 |
| thua domain-containing protein | DEP83_08905 | Not Available | Positive | 2204307 - 2205272 | 36931.3 |
| arabinan endo-1,5-alpha-l-arabinosidase | DEP83_08910 | Not Available | Positive | 2205412 - 2206410 | 38523.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
