Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoprotein signal peptidase | DEP83_08250 | Not Available | Negative | 2047622 - 2048293 | 25297.2 |
| molecular chaperone dnak | DEP83_08255 | Not Available | Negative | 2048304 - 2048684 | 14251.8 |
| isoleucine--trna ligase | DEP83_08260 | Not Available | Negative | 2048812 - 2052228 | 130793.0 |
| endonuclease | DEP83_08265 | Not Available | Positive | 2052407 - 2053258 | 32183.2 |
| aspartate aminotransferase | DEP83_08270 | Not Available | Negative | 2053330 - 2054523 | 43175.8 |
| Trna-ser | Not Available | Not Available | Positive | 2055179 - 2055265 | Not Available |
| endolytic transglycosylase mltg | DEP83_08280 | Not Available | Positive | 2055379 - 2056416 | 39983.3 |
| aldo/keto reductase | DEP83_08285 | Not Available | Negative | 2056448 - 2057272 | 31017.0 |
| riboflavin biosynthesis protein ribf | DEP83_08290 | Not Available | Negative | 2057293 - 2058222 | 35435.6 |
| duf1080 domain-containing protein | DEP83_08295 | Not Available | Positive | 2058455 - 2059723 | 47692.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
