Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DEP83_07945 | Not Available | Negative | 1966211 - 1969393 | 115622.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DEP83_07950 | Not Available | Negative | 1970058 - 1971515 | 54210.7 |
| susc/raga family tonb-linked outer membrane protein | DEP83_07955 | Not Available | Negative | 1971533 - 1974850 | 121517.0 |
| hypothetical protein | DEP83_07960 | Not Available | Negative | 1975333 - 1976313 | 35192.0 |
| peptidylprolyl isomerase | DEP83_07965 | Not Available | Negative | 1976398 - 1976982 | 21314.4 |
| nad-dependent protein deacylase | DEP83_07970 | Not Available | Positive | 1977096 - 1977782 | 25536.8 |
| type ii toxin-antitoxin system yafq family toxin | DEP83_07975 | Not Available | Negative | 1977881 - 1978156 | 11059.5 |
| toxin-antitoxin system protein | DEP83_07980 | Not Available | Negative | 1978156 - 1978410 | 9771.92 |
| dna mismatch repair protein muts | DEP83_07985 | Not Available | Positive | 1978719 - 1981307 | 97544.8 |
| thymidine kinase | DEP83_07990 | Not Available | Positive | 1981361 - 1981930 | 21327.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
