Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4954 domain-containing protein | DEP83_07895 | Not Available | Positive | 1950257 - 1952248 | 74433.7 |
| serine acetyltransferase | DEP83_07900 | Not Available | Positive | 1952272 - 1953093 | 30400.8 |
| transcription-repair coupling factor | DEP83_07905 | Not Available | Negative | 1953090 - 1956437 | 126814.0 |
| glycosyl transferase | DEP83_07910 | Not Available | Positive | 1956507 - 1958201 | 64532.5 |
| duf3417 domain-containing protein | DEP83_07915 | Not Available | Positive | 1958281 - 1960845 | 99012.7 |
| arac family transcriptional regulator | DEP83_07920 | Not Available | Negative | 1960972 - 1961454 | 18681.6 |
| hypothetical protein | DEP83_07925 | Not Available | Negative | 1961441 - 1961869 | 15678.8 |
| hypothetical protein | DEP83_07930 | Not Available | Negative | 1962066 - 1963568 | 58653.1 |
| hypothetical protein | DEP83_07935 | Not Available | Negative | 1963896 - 1964675 | 28651.5 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DEP83_07940 | Not Available | Negative | 1964729 - 1966195 | 54536.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
