Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gscfa domain protein | DEP83_00670 | Not Available | Negative | 136337 - 137317 | 37914.2 |
| rlmi/rlmk family 23s rrna methyltransferase | DEP83_00675 | Not Available | Negative | 137637 - 138830 | 44020.8 |
| 3'-5' exonuclease | DEP83_00680 | Not Available | Negative | 138827 - 139402 | 21747.3 |
| duf5063 domain-containing protein | DEP83_00685 | Not Available | Negative | 139393 - 139965 | 21943.9 |
| hypothetical protein | DEP83_00690 | Not Available | Positive | 140284 - 141111 | 30527.8 |
| protease | DEP83_00695 | Not Available | Positive | 141178 - 142446 | 45304.7 |
| hypothetical protein | DEP83_00700 | Not Available | Positive | 142454 - 142684 | 8738.32 |
| ribosome assembly cofactor rimp | DEP83_00705 | Not Available | Positive | 142833 - 143297 | 17396.6 |
| transcription termination/antitermination protein nusa | DEP83_00710 | Not Available | Positive | 143306 - 144592 | 49091.0 |
| translation initiation factor if-2 | DEP83_00715 | Not Available | Positive | 144661 - 147723 | 113489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
