Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hybrid sensor histidine kinase/response regulator | DEP83_07495 | Not Available | Negative | 1849103 - 1853350 | 162658.0 |
| arabinan endo-1,5-alpha-l-arabinosidase | DEP83_07500 | Not Available | Positive | 1853669 - 1855027 | 52333.5 |
| alpha-glucosidase | DEP83_07505 | Not Available | Positive | 1855193 - 1857148 | 72867.4 |
| alpha-n-arabinofuranosidase | DEP83_07510 | Not Available | Positive | 1857259 - 1858800 | 58261.9 |
| l-ribulose-5-phosphate 4-epimerase | DEP83_07515 | Not Available | Positive | 1858812 - 1859498 | 25162.0 |
| l-arabinose isomerase | DEP83_07520 | Not Available | Positive | 1859525 - 1861030 | 55959.8 |
| ribulokinase | DEP83_07525 | Not Available | Positive | 1861060 - 1862733 | 61046.6 |
| alpha-l-arabinofuranosidase | DEP83_07530 | Not Available | Positive | 1862744 - 1865347 | 97986.9 |
| glycosyl hydrolase | DEP83_07535 | Not Available | Positive | 1865385 - 1867760 | 89384.5 |
| alpha-l-arabinofuranosidase | DEP83_07540 | Not Available | Positive | 1867885 - 1869849 | 74080.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
