Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine synthase b | DEP83_07395 | Not Available | Positive | 1800161 - 1801876 | 64816.2 |
| sodium/glucose cotransporter | DEP83_07400 | Not Available | Positive | 1802126 - 1804027 | 69757.5 |
| hypothetical protein | DEP83_07405 | Not Available | Positive | 1804111 - 1805997 | 70916.7 |
| hybrid sensor histidine kinase/response regulator | DEP83_07410 | Not Available | Negative | 1806014 - 1810126 | 156664.0 |
| beta-galactosidase | DEP83_07415 | Not Available | Positive | 1810381 - 1813509 | 119476.0 |
| susc/raga family protein | DEP83_07420 | Not Available | Positive | 1813891 - 1817133 | 119409.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_07425 | Not Available | Positive | 1817153 - 1819204 | 77185.9 |
| susc/raga family tonb-linked outer membrane protein | DEP83_07430 | Not Available | Positive | 1819543 - 1822749 | 120272.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_07435 | Not Available | Positive | 1822762 - 1824681 | 73296.7 |
| hypothetical protein | DEP83_07440 | Not Available | Positive | 1824704 - 1825888 | 44680.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
