Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidinol dehydrogenase | DEP83_07295 | Not Available | Positive | 1773941 - 1775290 | 48885.8 |
| histidinol-phosphate transaminase | DEP83_07300 | Not Available | Positive | 1775277 - 1776311 | 39221.0 |
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase | DEP83_07305 | Not Available | Positive | 1776362 - 1777450 | 40897.5 |
| imidazole glycerol phosphate synthase subunit hish | DEP83_07310 | Not Available | Positive | 1777522 - 1778103 | 21917.6 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | DEP83_07315 | Not Available | Positive | 1778174 - 1778887 | 26009.2 |
| imidazole glycerol phosphate synthase subunit hisf | DEP83_07320 | Not Available | Positive | 1779225 - 1779980 | 27127.7 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase | DEP83_07325 | Not Available | Positive | 1780024 - 1780611 | 21932.3 |
| sam-dependent methyltransferase | DEP83_07330 | Not Available | Negative | 1780613 - 1781815 | 45102.9 |
| 50s ribosomal protein l27 | DEP83_07335 | Not Available | Negative | 1781911 - 1782180 | 9580.46 |
| 50s ribosomal protein l21 | DEP83_07340 | Not Available | Negative | 1782201 - 1782512 | 11748.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
