Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_07195 | Not Available | Positive | 1745790 - 1747784 | 75873.1 |
| dna-binding response regulator | DEP83_07200 | Not Available | Positive | 1747771 - 1748403 | 23764.4 |
| hypothetical protein | DEP83_07205 | Not Available | Negative | 1748421 - 1749284 | 33714.1 |
| hypothetical protein | DEP83_07210 | Not Available | Negative | 1749291 - 1751366 | 77525.5 |
| hypothetical protein | DEP83_07215 | Not Available | Negative | 1751433 - 1753589 | 78689.8 |
| hypothetical protein | DEP83_07220 | Not Available | Negative | 1753704 - 1755026 | 49446.6 |
| proline--trna ligase | DEP83_07225 | Not Available | Positive | 1755196 - 1756677 | 55959.6 |
| 1,4-dihydroxy-2-naphthoate octaprenyltransferase | DEP83_07230 | Not Available | Positive | 1756691 - 1757596 | 33046.2 |
| alpha-l-fucosidase | DEP83_07235 | Not Available | Negative | 1757605 - 1758906 | 48958.5 |
| hypothetical protein | DEP83_07240 | Not Available | Negative | 1758919 - 1759569 | 24662.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
