Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| saccharopine dehydrogenase | DEP83_07045 | Not Available | Positive | 1711590 - 1712792 | 45222.7 |
| c4-dicarboxylate abc transporter | DEP83_07050 | Not Available | Positive | 1712889 - 1713965 | 40922.3 |
| nitrate reductase subunit alpha | DEP83_07055 | Not Available | Positive | 1714106 - 1717801 | 139858.0 |
| nitrate reductase subunit beta | DEP83_07060 | Not Available | Positive | 1717815 - 1719299 | 56256.6 |
| nitrate reductase molybdenum cofactor assembly chaperone | DEP83_07065 | Not Available | Positive | 1719299 - 1719922 | 24028.8 |
| respiratory nitrate reductase subunit gamma | DEP83_07070 | Not Available | Positive | 1719958 - 1720635 | 25925.5 |
| hypothetical protein | DEP83_07075 | Not Available | Negative | 1720637 - 1721836 | 45784.4 |
| hypothetical protein | DEP83_07080 | Not Available | Negative | 1721812 - 1722429 | 22497.6 |
| hypothetical protein | DEP83_07085 | Not Available | Negative | 1722472 - 1722990 | 19764.9 |
| aspartate carbamoyltransferase | DEP83_07090 | Not Available | Positive | 1723456 - 1724373 | 34806.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
