Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrofolate reductase | DEP83_06945 | Not Available | Positive | 1683494 - 1684003 | 19150.7 |
| rna polymerase subunit sigma-70 | DEP83_06950 | Not Available | Positive | 1684014 - 1684589 | 22899.6 |
| hypothetical protein | DEP83_06955 | Not Available | Positive | 1684648 - 1685814 | 44193.8 |
| susc/raga family protein | DEP83_06960 | Not Available | Positive | 1685977 - 1689885 | 144955.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_06965 | Not Available | Positive | 1689897 - 1691732 | 69891.7 |
| cellulase | DEP83_06970 | Not Available | Positive | 1691866 - 1694385 | 95092.5 |
| xanthan lyase | DEP83_06975 | Not Available | Positive | 1694451 - 1697516 | 115430.0 |
| glycosyl transferase | DEP83_06980 | Not Available | Positive | 1697616 - 1699070 | 55425.2 |
| amidase | DEP83_06985 | Not Available | Positive | 1699067 - 1700380 | 49847.2 |
| mfs transporter | DEP83_06990 | Not Available | Positive | 1700420 - 1701715 | 48289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
