Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-54 factor | DEP83_06895 | Not Available | Positive | 1673920 - 1675374 | 55776.0 |
| hypothetical protein | DEP83_06900 | Not Available | Positive | 1675407 - 1676021 | 23431.2 |
| glycine cleavage system protein gcvh | DEP83_06905 | Not Available | Positive | 1676107 - 1676484 | 13860.2 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | DEP83_06910 | Not Available | Positive | 1676496 - 1677002 | 17628.8 |
| iron dicitrate transport regulator fecr | DEP83_06915 | Not Available | Positive | 1677018 - 1677626 | 21799.6 |
| dihydrofolate reductase | DEP83_06920 | Not Available | Positive | 1677713 - 1679758 | 77330.2 |
| dihydrofolate synthase | DEP83_06925 | Not Available | Positive | 1679841 - 1681127 | 47320.8 |
| hypothetical protein | DEP83_06930 | Not Available | Negative | 1681128 - 1681610 | 18014.1 |
| hypothetical protein | DEP83_06935 | Not Available | Negative | 1681776 - 1682375 | 19997.9 |
| thymidylate synthase | DEP83_06940 | Not Available | Positive | 1682703 - 1683497 | 30417.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
