Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DEP83_00570 | Not Available | Negative | 114255 - 114617 | 14338.2 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | DEP83_00575 | Not Available | Negative | 115142 - 116221 | 40204.4 |
| 3-phosphoglycerate dehydrogenase | DEP83_00580 | Not Available | Negative | 116337 - 117263 | 34557.5 |
| recombination protein recr | DEP83_00585 | Not Available | Positive | 117569 - 118201 | 23405.3 |
| hypothetical protein | DEP83_00590 | Not Available | Positive | 118198 - 118689 | 18737.8 |
| gnat family n-acetyltransferase | DEP83_00595 | Not Available | Positive | 118682 - 119212 | 20881.1 |
| threonylcarbamoyl-amp synthase | DEP83_00600 | Not Available | Positive | 119251 - 119814 | 20714.0 |
| chloride channel protein | DEP83_00605 | Not Available | Positive | 119852 - 121642 | 65831.5 |
| methionyl-trna formyltransferase | DEP83_00610 | Not Available | Positive | 121657 - 122634 | 36473.3 |
| hypothetical protein | DEP83_00615 | Not Available | Negative | 122641 - 124203 | 60241.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
