Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_06435 | Not Available | Positive | 1573461 - 1574297 | 32209.3 |
| duf1080 domain-containing protein | DEP83_06440 | Not Available | Positive | 1574326 - 1575063 | 27624.8 |
| metalloprotease | DEP83_06445 | Not Available | Positive | 1575127 - 1575999 | 31892.6 |
| gntr family transcriptional regulator | DEP83_06450 | Not Available | Negative | 1576064 - 1576795 | 28158.8 |
| susc/raga family tonb-linked outer membrane protein | DEP83_06455 | Not Available | Positive | 1577208 - 1580360 | 118230.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_06460 | Not Available | Positive | 1580372 - 1582324 | 72960.6 |
| hypothetical protein | DEP83_06465 | Not Available | Positive | 1582346 - 1583095 | 28031.1 |
| mannose-6-phosphate isomerase | DEP83_06470 | Not Available | Positive | 1583187 - 1584920 | 66489.5 |
| hypothetical protein | DEP83_06475 | Not Available | Positive | 1584956 - 1586077 | 40548.9 |
| hypothetical protein | DEP83_06480 | Not Available | Positive | 1586117 - 1589263 | 119341.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
