Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | DEP83_06385 | Not Available | Negative | 1559690 - 1562644 | 107875.0 |
| peptidase m3 | DEP83_06390 | Not Available | Negative | 1562833 - 1564923 | 78797.0 |
| s9 family peptidase | DEP83_06395 | Not Available | Negative | 1565039 - 1566211 | 45002.1 |
| transcriptional regulator | DEP83_06400 | Not Available | Positive | 1566473 - 1566841 | 14616.4 |
| hypothetical protein | DEP83_06405 | Not Available | Positive | 1566847 - 1568286 | 54513.4 |
| mbl fold metallo-hydrolase | DEP83_06410 | Not Available | Negative | 1568309 - 1569112 | 30504.2 |
| duf4924 domain-containing protein | DEP83_06415 | Not Available | Positive | 1569185 - 1569721 | 20796.1 |
| dtdp-4-dehydrorhamnose reductase | DEP83_06420 | Not Available | Positive | 1569828 - 1570787 | 35081.9 |
| peptide chain release factor 3 | DEP83_06425 | Not Available | Positive | 1570895 - 1572469 | 60026.0 |
| mechanosensitive ion channel protein mscs | DEP83_06430 | Not Available | Negative | 1572448 - 1573374 | 33684.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
