Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose dehydrogenase | DEP83_06285 | Not Available | Negative | 1537886 - 1539118 | 45026.1 |
| acetyl-coa synthetase | DEP83_06290 | Not Available | Negative | 1539188 - 1542475 | 123466.0 |
| alcohol dehydrogenase | DEP83_06295 | Not Available | Negative | 1542542 - 1543702 | 42283.6 |
| hypothetical protein | DEP83_06300 | Not Available | Positive | 1543921 - 1544472 | 20933.2 |
| hypothetical protein | DEP83_06305 | Not Available | Positive | 1544472 - 1546235 | 65992.6 |
| hypothetical protein | DEP83_06310 | Not Available | Positive | 1546120 - 1546842 | 26754.4 |
| sam-dependent methyltransferase | DEP83_06315 | Not Available | Positive | 1546903 - 1549008 | 81665.0 |
| lipid kinase | DEP83_06320 | Not Available | Negative | 1549009 - 1549965 | 35051.3 |
| sodium:solute symporter | DEP83_06325 | Not Available | Positive | 1550138 - 1551595 | 54381.7 |
| yiha family ribosome biogenesis gtp-binding protein | DEP83_06330 | Not Available | Positive | 1551607 - 1552203 | 22554.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
