Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inositol monophosphatase | DEP83_06085 | Not Available | Negative | 1496807 - 1497592 | 28778.3 |
| s9 family peptidase | DEP83_06090 | Not Available | Negative | 1497628 - 1500177 | 96105.7 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | DEP83_06095 | Not Available | Negative | 1500222 - 1501040 | 30129.6 |
| hypothetical protein | DEP83_06100 | Not Available | Negative | 1501080 - 1503230 | 84223.0 |
| crp/fnr family transcriptional regulator | DEP83_06105 | Not Available | Positive | 1503352 - 1504053 | 26685.6 |
| hypothetical protein | DEP83_06110 | Not Available | Positive | 1504139 - 1505650 | 57933.0 |
| outer membrane protein assembly factor bamd | DEP83_06115 | Not Available | Positive | 1505732 - 1506547 | 32149.9 |
| rna polymerase rpb6 | DEP83_06120 | Not Available | Positive | 1506583 - 1506915 | 13182.6 |
| duf4293 domain-containing protein | DEP83_06125 | Not Available | Positive | 1506920 - 1507375 | 17031.8 |
| peptidase m48 family protein | DEP83_06130 | Not Available | Negative | 1507467 - 1508381 | 33141.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
