Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohydrolase | DEP83_05980 | Not Available | Positive | 1471292 - 1471828 | 20545.9 |
| nucleotide exchange factor grpe | DEP83_05985 | Not Available | Positive | 1471971 - 1472492 | 19615.1 |
| molecular chaperone dnaj | DEP83_05990 | Not Available | Positive | 1472494 - 1473651 | 41629.6 |
| acetate--coa ligase | DEP83_05995 | Not Available | Positive | 1473873 - 1475780 | 71882.1 |
| n-acetylneuraminate lyase | DEP83_06000 | Not Available | Negative | 1475866 - 1476792 | 33938.2 |
| mfs transporter | DEP83_06005 | Not Available | Negative | 1476802 - 1478079 | 46856.2 |
| cyclically-permuted mutarotase family protein | DEP83_06010 | Not Available | Negative | 1478090 - 1479226 | 40762.4 |
| beta-n-acetylhexosaminidase | DEP83_06015 | Not Available | Negative | 1479335 - 1481293 | 74770.8 |
| sialate o-acetylesterase | DEP83_06020 | Not Available | Negative | 1481303 - 1483390 | 78299.4 |
| sialate o-acetylesterase | DEP83_06025 | Not Available | Negative | 1483392 - 1484054 | 24883.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
