Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferrous iron transport protein b | DEP83_05680 | Not Available | Negative | 1384791 - 1387283 | 93922.7 |
| class ii fumarate hydratase | DEP83_05685 | Not Available | Positive | 1387422 - 1388822 | 50632.8 |
| fumarate hydratase | DEP83_05690 | Not Available | Positive | 1388903 - 1390543 | 60126.8 |
| beta-galactosidase | DEP83_05695 | Not Available | Positive | 1390609 - 1393158 | 96685.2 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | DEP83_05700 | Not Available | Positive | 1393241 - 1394650 | 54103.7 |
| hypothetical protein | DEP83_05705 | Not Available | Positive | 1394763 - 1396433 | 65349.5 |
| susc/raga family tonb-linked outer membrane protein | DEP83_05710 | Not Available | Positive | 1396805 - 1399840 | 111519.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_05715 | Not Available | Positive | 1399852 - 1401342 | 55410.5 |
| duf5116 domain-containing protein | DEP83_05720 | Not Available | Positive | 1401363 - 1402805 | 53173.5 |
| cycloisomaltooligosaccharide glucanotransferase | DEP83_05725 | Not Available | Positive | 1402865 - 1404619 | 66496.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
