Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_05160 | Not Available | Negative | 1273009 - 1273392 | 14698.4 |
| hypothetical protein | DEP83_05165 | Not Available | Negative | 1273394 - 1273954 | 21262.4 |
| hypothetical protein | DEP83_05170 | Not Available | Negative | 1273964 - 1274359 | 14628.2 |
| large conductance mechanosensitive channel protein mscl | DEP83_05175 | Not Available | Negative | 1274511 - 1274927 | 15173.9 |
| amidinotransferase | DEP83_05180 | Not Available | Negative | 1274959 - 1275861 | 33811.7 |
| ornithine--oxo-acid transaminase | DEP83_05185 | Not Available | Negative | 1275911 - 1277149 | 45154.9 |
| duf1080 domain-containing protein | DEP83_05190 | Not Available | Negative | 1277177 - 1277815 | 23812.7 |
| two-component system response regulator | DEP83_05195 | Not Available | Positive | 1278022 - 1279566 | 60028.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DEP83_05200 | Not Available | Positive | 1279573 - 1279992 | 15935.0 |
| hypothetical protein | DEP83_05205 | Not Available | Positive | 1280095 - 1282155 | 79288.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
