Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_05060 | Not Available | Positive | 1244382 - 1245548 | 43917.6 |
| hypothetical protein | DEP83_05065 | Not Available | Positive | 1245714 - 1248260 | 96521.8 |
| hypothetical protein | DEP83_05070 | Not Available | Negative | 1248523 - 1248738 | 7901.44 |
| susc/raga family tonb-linked outer membrane protein | DEP83_05075 | Not Available | Positive | 1248806 - 1251820 | 111888.0 |
| ragb/susd family nutrient uptake outer membrane protein | DEP83_05080 | Not Available | Positive | 1251869 - 1253422 | 57809.2 |
| arac family transcriptional regulator | DEP83_05085 | Not Available | Positive | 1253874 - 1254755 | 33383.9 |
| arginine--trna ligase | DEP83_05090 | Not Available | Negative | 1254899 - 1256692 | 67879.3 |
| trna threonylcarbamoyladenosine dehydratase | DEP83_05095 | Not Available | Negative | 1256767 - 1257507 | 27292.2 |
| rubrerythrin family protein | DEP83_05100 | Not Available | Negative | 1257799 - 1258377 | 22007.2 |
| abc transporter | DEP83_05105 | Not Available | Negative | 1258556 - 1260430 | 72386.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
