Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Porphyromonadaceae |
| Genus | /taxonomy?family=Porphyromonadaceae&kingdom=Pseudomonadati&klass=Bacteroidia&level=genus&order=Bacteroidales&phylum=Bacteroidota |
| Species | Porphyromonadaceae bacterium |
| Strain | MAG TPA_asm: |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
MAG TPA_asm: Porphyromonadaceae bacterium isolate UBA12083
Gene Summary
Adenine Count
937810 bp
Thymine Count
921633 bp
Guanine Count
810309 bp
Cytosine Count
811237 bp
Genome Length
3480997 bp
Protein-coding Genes
2678 genes
Non-Coding Genes
53 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEP83_00415 | Not Available | Negative | 87738 - 90407 | 103640.0 |
| putative transporter | DEP83_00420 | Not Available | Negative | 90601 - 92271 | 60117.4 |
| family 2 glycosyl transferase | DEP83_00425 | Not Available | Positive | 92442 - 93158 | 27440.1 |
| 50s ribosomal protein l11 methyltransferase | DEP83_00430 | Not Available | Negative | 93165 - 94001 | 31306.6 |
| hypothetical protein | DEP83_00435 | Not Available | Positive | 94297 - 95385 | 41567.8 |
| rna polymerase subunit sigma-70 | DEP83_00440 | Not Available | Positive | 95439 - 95984 | 21191.2 |
| hypothetical protein | DEP83_00445 | Not Available | Positive | 96037 - 96447 | 16304.1 |
| hypothetical protein | DEP83_00450 | Not Available | Positive | 96565 - 96939 | 14844.7 |
| dna metabolism protein | DEP83_00455 | Not Available | Negative | 96944 - 97705 | 30104.1 |
| putative dna modification/repair radical sam protein | DEP83_00460 | Not Available | Negative | 97719 - 98981 | 47999.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
