MAG TPA_asm: Deltaproteobacteria bacterium

Kingdom

Pseudomonadati

Phylum

Myxococcota

Class

Myxococcia

Order

Family

Genus

Description

MAG TPA_asm is a Deltaproteobacteria bacterium predominantly found in the rhizosphere, the region of soil surrounding plant roots that is rich in microbial activity. This bacterium is characterized by having two replicons, indicating a complex genetic structure that could contribute to its adaptability and functionality within its ecological niche. Accessions associated with MAG TPA_asm include DNRS00000000.1 and DOGV00000000.1, which provide a basis for further genomic and taxonomic studies. The rhizosphere habitat suggests that MAG TPA_asm may play a role in plant-microbe interactions, potentially influencing plant health and nutrient uptake. Microbial communities in the rhizosphere are known to have significant impacts on plant growth and soil health. The presence of MAG TPA_asm in this environment highlights its potential as a key player in the dynamics of soil microbiomes, where interactions with plants and other microorganisms can lead to beneficial outcomes such as enhanced nutrient cycling and disease suppression. Understanding the specific functions and interactions of MAG TPA_asm within the rhizosphere ecosystem could provide insights into its role in supporting plant life and maintaining soil health. This knowledge may be valuable for agricultural practices aimed at promoting sustainable crop production and enhancing soil biodiversity.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatrhizosphere
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Deltaproteobacteria bacterium isolate UBA10170

Gene Summary

Adenine Count

749528 bp

Thymine Count

737825 bp

Guanine Count

550298 bp

Cytosine Count

547660 bp

Genome Length

2586493 bp

Protein-coding Genes

2612 genes

Non-Coding Genes

32 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
penicillin-binding proteinDD725_00580Not AvailablePositive121233 - 12316770991.7
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseDD725_00585Not AvailablePositive123206 - 12472355633.1
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseDD725_00590Not AvailablePositive124720 - 12606647590.0
phospho-n-acetylmuramoyl-pentapeptide- transferaseDD725_00595Not AvailablePositive126095 - 12716839439.9
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseDD725_00600Not AvailablePositive127207 - 12855348782.5
putative lipid ii flippase ftswDD725_00605Not AvailablePositive128550 - 12965340223.2
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseDD725_00610Not AvailablePositive129733 - 13087241687.9
udp-n-acetylmuramate--l-alanine ligaseDD725_00615Not AvailablePositive130897 - 13230351387.1
udp-n-acetylenolpyruvoylglucosamine reductaseDD725_00620Not AvailablePositive132300 - 13321732962.3
d-alanine--d-alanine ligaseDD725_00625Not AvailablePositive133240 - 13416933283.1

Displaying genes 121 – 130 of 5238 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.