MAG TPA_asm: Bacteroidales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Genus

Description

MAG TPA_asm is a Bacteroidales bacterium characterized by the presence of two replicons. It has been identified in the gut microbiome of Oryctolagus cuniculus, commonly known as the European rabbit. This association with a specific host suggests that MAG TPA_asm may play a role in the digestive processes or overall health of the rabbit. The organism is cataloged under two accessions: DNKC00000000.1 and DNOQ00000000.1, which provide genetic information essential for further studies. The dual replicon structure could indicate a potential for genetic diversity or adaptability, traits that are often beneficial in fluctuating environmental conditions or host interactions. Understanding the role of MAG TPA_asm within the gut microbiome of rabbits may illuminate its ecological significance. As a member of the Bacteroidales order, it is likely involved in the breakdown of complex carbohydrates, which is crucial for nutrient absorption in herbivorous mammals. This bacterium may contribute to the fermentation processes that convert plant fibers into short-chain fatty acids, thereby providing energy to the host and influencing its metabolic health. Overall, the study of MAG TPA_asm offers insights into microbial interactions within the rabbit gut and highlights the importance of gut microbiota in the nutrition and health of herbivores.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Bacteroidales bacterium isolate UBA12261 contig_6624,

Gene Summary

Adenine Count

1119132 bp

Thymine Count

1121543 bp

Guanine Count

793995 bp

Cytosine Count

793102 bp

Genome Length

3940772 bp

Protein-coding Genes

3390 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
b12-binding domain-containing radical sam proteinDDW27_10285Not AvailablePositive2286794 - 228737722257.9
susc/raga family tonb-linked outer membrane proteinDDW27_10290Not AvailablePositive2287559 - 229019897218.6
ragb/susd family nutrient uptake outer membrane proteinDDW27_10295Not AvailablePositive2290563 - 229216161737.4
sodium/glucose cotransporterDDW27_10300Not AvailablePositive2292291 - 229409965660.3
transaldolaseDDW27_10305Not AvailablePositive2294308 - 229534539167.0
3d-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing)DDW27_10310Not AvailablePositive2295440 - 229729967386.8
methylmalonate-semialdehyde dehydrogenase (coa acylating)DDW27_10315Not AvailablePositive2297452 - 229851138266.1
hypothetical proteinDDW27_10320Not AvailableNegative2298706 - 2301525108143.0
hypothetical proteinDDW27_10325Not AvailablePositive2301754 - 23019367108.73
hypothetical proteinDDW27_10330Not AvailablePositive2301933 - 23021819860.74

Displaying genes 5411 – 5420 of 7100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.