MAG TPA_asm: Bacteroidales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Genus

Description

MAG TPA_asm is a Bacteroidales bacterium characterized by the presence of two replicons. It has been identified in the gut microbiome of Oryctolagus cuniculus, commonly known as the European rabbit. This association with a specific host suggests that MAG TPA_asm may play a role in the digestive processes or overall health of the rabbit. The organism is cataloged under two accessions: DNKC00000000.1 and DNOQ00000000.1, which provide genetic information essential for further studies. The dual replicon structure could indicate a potential for genetic diversity or adaptability, traits that are often beneficial in fluctuating environmental conditions or host interactions. Understanding the role of MAG TPA_asm within the gut microbiome of rabbits may illuminate its ecological significance. As a member of the Bacteroidales order, it is likely involved in the breakdown of complex carbohydrates, which is crucial for nutrient absorption in herbivorous mammals. This bacterium may contribute to the fermentation processes that convert plant fibers into short-chain fatty acids, thereby providing energy to the host and influencing its metabolic health. Overall, the study of MAG TPA_asm offers insights into microbial interactions within the rabbit gut and highlights the importance of gut microbiota in the nutrition and health of herbivores.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Bacteroidales bacterium isolate UBA12261 contig_6624,

Gene Summary

Adenine Count

1119132 bp

Thymine Count

1121543 bp

Guanine Count

793995 bp

Cytosine Count

793102 bp

Genome Length

3940772 bp

Protein-coding Genes

3390 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydrogenaseDDW27_10010Not AvailableNegative2227430 - 222849139047.2
hypothetical proteinDDW27_10020Not AvailableNegative2229901 - 22301158318.2
acetylxylan esteraseDDW27_10025Not AvailableNegative2230257 - 223166353124.2
gxxexxy proteinDDW27_10030Not AvailableNegative2231761 - 223213814104.7
hypothetical proteinDDW27_10035Not AvailableNegative2232331 - 223288120900.4
hypothetical proteinDDW27_10040Not AvailablePositive2232882 - 223392239490.5
hypothetical proteinDDW27_10050Not AvailableNegative2236786 - 223761031553.3
hypothetical proteinDDW27_10055Not AvailableNegative2237622 - 223794612477.7
hypothetical proteinDDW27_10060Not AvailableNegative2237947 - 223837414699.2
hypothetical proteinDDW27_10070Not AvailableNegative2239966 - 224103039185.6

Displaying genes 5361 – 5370 of 7100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.