MAG TPA_asm: Bacteroidales bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Genus

Description

MAG TPA_asm is a Bacteroidales bacterium characterized by the presence of two replicons. It has been identified in the gut microbiome of Oryctolagus cuniculus, commonly known as the European rabbit. This association with a specific host suggests that MAG TPA_asm may play a role in the digestive processes or overall health of the rabbit. The organism is cataloged under two accessions: DNKC00000000.1 and DNOQ00000000.1, which provide genetic information essential for further studies. The dual replicon structure could indicate a potential for genetic diversity or adaptability, traits that are often beneficial in fluctuating environmental conditions or host interactions. Understanding the role of MAG TPA_asm within the gut microbiome of rabbits may illuminate its ecological significance. As a member of the Bacteroidales order, it is likely involved in the breakdown of complex carbohydrates, which is crucial for nutrient absorption in herbivorous mammals. This bacterium may contribute to the fermentation processes that convert plant fibers into short-chain fatty acids, thereby providing energy to the host and influencing its metabolic health. Overall, the study of MAG TPA_asm offers insights into microbial interactions within the rabbit gut and highlights the importance of gut microbiota in the nutrition and health of herbivores.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Bacteroidales bacterium isolate UBA12261 contig_6624,

Gene Summary

Adenine Count

1119132 bp

Thymine Count

1121543 bp

Guanine Count

793995 bp

Cytosine Count

793102 bp

Genome Length

3940772 bp

Protein-coding Genes

3390 genes

Non-Coding Genes

26 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hisfDCZ51_08340Not AvailablePositive1838265 - 183893923862.6
bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphataseDCZ51_08345Not AvailablePositive1839118 - 183970522156.7
hypothetical proteinDCZ51_08350Not AvailablePositive1840042 - 184087230892.3
aminotransferaseDCZ51_08355Not AvailablePositive1840862 - 184203744404.1
prephenate dehydrogenaseDCZ51_08360Not AvailablePositive1842039 - 184288431031.6
3-deoxy-7-phosphoheptulonate synthaseDCZ51_08365Not AvailablePositive1842898 - 184401342080.0
3-phosphoshikimate 1-carboxyvinyltransferaseDCZ51_08370Not AvailablePositive1844027 - 184527744371.7
trpb-like pyridoxal phosphate-dependent enzymeDCZ51_08375Not AvailablePositive1845968 - 184720345169.2
nipsnap family containing proteinDCZ51_08380Not AvailableNegative1847286 - 184808930686.9
hypothetical proteinDCZ51_08385Not AvailableNegative1848179 - 184926440204.8

Displaying genes 1661 – 1670 of 7100 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.