MAG TPA_asm: Prolixibacteraceae bacterium

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Prolixibacteraceae

Genus

Description

MAG TPA_asm, classified within the Prolixibacteraceae family, is characterized by having three replicons. This trait suggests a complex genomic architecture that may contribute to its adaptability and metabolic capabilities. The organism has been associated with three distinct accessions: DMSQ00000000.1, DOAQ00000000.1, and DPRM00000000.1. Each accession likely represents different aspects of its genomic data, potentially aiding in the understanding of its genetic diversity and functional potential. The presence of multiple replicons in MAG TPA_asm may indicate a sophisticated mechanism for gene regulation and replication, which can be advantageous in various environmental conditions. This adaptability is crucial for survival in diverse habitats, as it may enable the bacterium to respond effectively to fluctuating resources or stressors. In summary, the structural complexity indicated by the three replicons and the distinct genomic accessions of MAG TPA_asm highlights its potential ecological significance within its environment. This bacteria could play a role in nutrient cycling or microbial community dynamics, contributing to the overall health and stability of its ecosystem. Further research into its specific functions and interactions could provide insights into its ecological role and potential applications in biotechnology or environmental management.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG TPA_asm: Prolixibacteraceae bacterium isolate UBA8504

Gene Summary

Adenine Count

1431174 bp

Thymine Count

1419059 bp

Guanine Count

1013527 bp

Cytosine Count

1007690 bp

Genome Length

4873869 bp

Protein-coding Genes

4026 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
crispr-associated endonuclease cas2DHV48_05480Not AvailableNegative1220064 - 122035411205.5
subtype i-c crispr-associated endonuclease cas1DHV48_05485Not AvailableNegative1220369 - 122140038914.4
crispr-associated protein cas4DHV48_05490Not AvailableNegative1221477 - 122216626506.4
hypothetical proteinDHV48_05495Not AvailableNegative1222256 - 122292125801.9
type i-c crispr-associated protein cas7/csd2DHV48_05500Not AvailableNegative1223074 - 122419241420.2
type i-c crispr-associated protein cas8c/csd1DHV48_05505Not AvailableNegative1224211 - 122596866380.4
type i-c crispr-associated protein cas5DHV48_05510Not AvailableNegative1225965 - 122665727262.6
flavodoxinDHV48_05515Not AvailableNegative1226873 - 122739718917.2
prephenate dehydrataseDHV48_05520Not AvailableNegative1227421 - 122825731315.6
hypothetical proteinDHV48_05525Not AvailablePositive1228816 - 122946325087.5

Displaying genes 1091 – 1100 of 13346 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.